dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003134_34|CGC1
Gene ID: MGYG000003134_01729
Location and strand information: 346 - 1503 (+)
Family: 3.A.1.11.7
Protein type: TC
Protein description: Spermidine/putrescine import ATP-binding protein PotA

Gene clsuter ID: MGYG000003134_34|CGC1
Gene ID: MGYG000003134_01730
Location and strand information: 1484 - 2290 (+)
Family: 3.A.1.11.7
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000003134_34|CGC1
Gene ID: MGYG000003134_01731
Location and strand information: 2287 - 3060 (+)
Family: 3.A.1.11.7
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YdcV

Gene clsuter ID: MGYG000003134_34|CGC1
Gene ID: MGYG000003134_01732
Location and strand information: 3057 - 4127 (+)
Family: 3.A.1.11.7
Protein type: TC
Protein description: Spermidine/putrescine-binding periplasmic protein

Gene clsuter ID: MGYG000003134_34|CGC1
Gene ID: MGYG000003134_01733
Location and strand information: 4804 - 5289 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003134_34|CGC1
Gene ID: MGYG000003134_01734
Location and strand information: 5310 - 7928 (+)
Family: null
Protein type: null
Protein description: Alanine--tRNA ligase

Gene clsuter ID: MGYG000003134_34|CGC1
Gene ID: MGYG000003134_01735
Location and strand information: 8122 - 9576 (-)
Family: GH13_5|CBM20|GH13
Protein type: CAZyme
Protein description: Alpha-amylase
Protein isoelectric point: 4.3055
Protein molecular weight: 55952.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003134_34|CGC1
Gene ID: MGYG000003134_01736
Location and strand information: 9755 - 10504 (+)
Family: 3.A.1.147.8
Protein type: TC
Protein description: ABC-type transporter ATP-binding protein EcsA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is alpha-glucan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003134_01729	Spermidine/putrescine import ATP-binding protein PotA	TC	346	1503	+	3.A.1.11.7
MGYG000003134_01730	Spermidine/putrescine transport system permease protein PotB	TC	1484	2290	+	3.A.1.11.7
MGYG000003134_01731	Inner membrane ABC transporter permease protein YdcV	TC	2287	3060	+	3.A.1.11.7
MGYG000003134_01732	Spermidine/putrescine-binding periplasmic protein	TC	3057	4127	+	3.A.1.11.7
MGYG000003134_01733	hypothetical protein	null	4804	5289	+	LOR
MGYG000003134_01734	Alanine--tRNA ligase	null	5310	7928	+	tRNA-synt_2c\| tRNA_SAD\| DHHA1
MGYG000003134_01735	Alpha-amylase	CAZyme	8122	9576	-	GH13_5\| CBM20\| GH13
MGYG000003134_01736	ABC-type transporter ATP-binding protein EcsA	TC	9755	10504	+	3.A.1.147.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature